STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000969605_00579Unannotated protein. (135 aa)    
Predicted Functional Partners:
GCA_000969605_00578
Unannotated protein.
 
 
 0.994
GCA_000969605_00574
Unannotated protein.
 
  
 0.992
GCA_000969605_00576
Unannotated protein.
 
  
 0.988
GCA_000969605_00575
Unannotated protein.
 
  
 0.987
GCA_000969605_01372
Unannotated protein.
 
  
 0.965
GCA_000969605_04717
Unannotated protein.
 
  
 0.964
GCA_000969605_00446
Unannotated protein.
 
  
 0.959
GCA_000969605_00447
Unannotated protein.
 
  
 0.956
GCA_000969605_01373
Unannotated protein.
 
  
 0.956
GCA_000969605_04718
Unannotated protein.
 
  
 0.954
Your Current Organism:
Aquincola tertiaricarbonis
NCBI taxonomy Id: 391953
Other names: A. tertiaricarbonis, Aquincola tertiaricarbonis Lechner et al. 2007, CIP 109243, DSM 18512, Ideonella sp. L108, strain L10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.