STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000969605_01201Unannotated protein. (299 aa)    
Predicted Functional Partners:
GCA_000969605_05033
Unannotated protein.
    
  0.812
GCA_000969605_00352
Unannotated protein.
    
 
 0.736
GCA_000969605_01202
Unannotated protein.
 
     0.672
GCA_000969605_05110
Unannotated protein.
 
0.656
GCA_000969605_02083
Unannotated protein.
 
0.652
GCA_000969605_00331
Unannotated protein.
 
0.638
GCA_000969605_01200
Unannotated protein.
       0.635
GCA_000969605_01086
Unannotated protein.
    
   0.613
GCA_000969605_01087
Unannotated protein.
    
   0.613
GCA_000969605_00780
Unannotated protein.
    
   0.611
Your Current Organism:
Aquincola tertiaricarbonis
NCBI taxonomy Id: 391953
Other names: A. tertiaricarbonis, Aquincola tertiaricarbonis Lechner et al. 2007, CIP 109243, DSM 18512, Ideonella sp. L108, strain L10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.