STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000969605_02246Unannotated protein. (384 aa)    
Predicted Functional Partners:
GCA_000969605_02245
Unannotated protein.
 0.999
GCA_000969605_00337
Unannotated protein.
 0.996
GCA_000969605_00346
Unannotated protein.
  
 0.993
GCA_000969605_02243
Unannotated protein.
 
  
 0.962
GCA_000969605_02242
Unannotated protein.
 
 
 
 0.942
GCA_000969605_00348
Unannotated protein.
 
 0.929
GCA_000969605_02244
Unannotated protein.
 
  
 0.926
GCA_000969605_00336
Unannotated protein.
  
 0.925
GCA_000969605_00347
Unannotated protein.
 
 0.920
GCA_000969605_02558
Unannotated protein.
   
 0.907
Your Current Organism:
Aquincola tertiaricarbonis
NCBI taxonomy Id: 391953
Other names: A. tertiaricarbonis, Aquincola tertiaricarbonis Lechner et al. 2007, CIP 109243, DSM 18512, Ideonella sp. L108, strain L10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.