STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000969605_04819Unannotated protein. (333 aa)    
Predicted Functional Partners:
GCA_000969605_03467
Unannotated protein.
    
 
 0.926
GCA_000969605_01993
Unannotated protein.
 
 
 
 0.899
GCA_000969605_00672
Unannotated protein.
    
   0.701
GCA_000969605_03381
Unannotated protein.
  
 
 0.669
GCA_000969605_00897
Unannotated protein.
    
   0.657
GCA_000969605_01603
Unannotated protein.
    
   0.657
GCA_000969605_05499
Unannotated protein.
    
   0.657
GCA_000969605_01807
Unannotated protein.
    
 
 0.623
GCA_000969605_01483
Unannotated protein.
    
   0.603
GCA_000969605_05134
Unannotated protein.
    
 0.550
Your Current Organism:
Aquincola tertiaricarbonis
NCBI taxonomy Id: 391953
Other names: A. tertiaricarbonis, Aquincola tertiaricarbonis Lechner et al. 2007, CIP 109243, DSM 18512, Ideonella sp. L108, strain L10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.