STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000969605_04878Unannotated protein. (760 aa)    
Predicted Functional Partners:
GCA_000969605_04876
Unannotated protein.
       0.773
GCA_000969605_04877
Unannotated protein.
       0.773
GCA_000969605_05462
Unannotated protein.
   
    0.578
GCA_000969605_04879
Unannotated protein.
     
 0.563
GCA_000969605_04237
Unannotated protein.
  
     0.514
GCA_000969605_00424
Unannotated protein.
  
     0.504
GCA_000969605_02463
Unannotated protein.
  
     0.487
GCA_000969605_02779
Unannotated protein.
  
     0.471
GCA_000969605_05579
Unannotated protein.
  
     0.444
GCA_000969605_03191
Unannotated protein.
  
     0.440
Your Current Organism:
Aquincola tertiaricarbonis
NCBI taxonomy Id: 391953
Other names: A. tertiaricarbonis, Aquincola tertiaricarbonis Lechner et al. 2007, CIP 109243, DSM 18512, Ideonella sp. L108, strain L10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.