STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU38755.1Stage II sporulation protein. (208 aa)    
Predicted Functional Partners:
SFU87922.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.770
SFU57132.1
Predicted membrane protein.
  
     0.766
SFU31373.1
Hypothetical protein.
  
     0.758
SFV09475.1
Hypothetical protein.
 
     0.747
SFU33168.1
Predicted arabinose efflux permease, MFS family.
  
     0.743
SFU38737.1
Hypothetical protein.
       0.737
SFU96728.1
Protein of unknown function.
  
     0.734
SFU60178.1
Hypothetical protein.
  
     0.729
SFU93854.1
Binding-protein-dependent transport system inner membrane component.
  
     0.728
SFV08786.1
Cytochrome c biogenesis protein CcdA.
  
     0.719
Your Current Organism:
Alicyclobacillus macrosporangiidus
NCBI taxonomy Id: 392015
Other names: A. macrosporangiidus, Alicyclobacillus macrosporangiidus Goto et al. 2007, Alicyclobacillus sp. 5A239-2O-A, DSM 17980, IAM 15370, JCM 21814, strain 5-A239-2O-A
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