STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU48351.1D-xylose transport system substrate-binding protein. (373 aa)    
Predicted Functional Partners:
SFU48369.1
D-xylose transport system ATP-binding protein.
 
 0.995
SFU48389.1
D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.977
SFU84718.1
Ribose transport system ATP-binding protein.
 
 0.935
SFU84736.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.870
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.751
SFV06320.1
Ribose transport system permease protein/methyl-galactoside transport system permease protein.
 
  
 0.652
SFU84749.1
Ribose transport system substrate-binding protein.
 
 
0.634
SFU48329.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
 
     0.606
SFU45415.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
  
  
 0.511
SFU84805.1
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
    0.450
Your Current Organism:
Alicyclobacillus macrosporangiidus
NCBI taxonomy Id: 392015
Other names: A. macrosporangiidus, Alicyclobacillus macrosporangiidus Goto et al. 2007, Alicyclobacillus sp. 5A239-2O-A, DSM 17980, IAM 15370, JCM 21814, strain 5-A239-2O-A
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