STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU45378.1Raffinose/stachyose/melibiose transport system permease protein. (281 aa)    
Predicted Functional Partners:
SFU45397.1
Raffinose/stachyose/melibiose transport system permease protein.
  0.983
SFU91237.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.977
SFU45415.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
 
 0.961
SFU37363.1
Multiple sugar transport system permease protein.
 
  0.911
SFU45862.1
Multiple sugar transport system permease protein.
 
  0.911
SFU45177.1
Raffinose/stachyose/melibiose transport system permease protein.
 
  0.911
SFU51427.1
Multiple sugar transport system permease protein.
 
  0.911
SFU71715.1
Multiple sugar transport system permease protein.
 
  0.911
SFU87697.1
Multiple sugar transport system permease protein/sn-glycerol 3-phosphate transport system permease protein.
 
  0.911
SFV04703.1
Raffinose/stachyose/melibiose transport system permease protein.
 
  0.911
Your Current Organism:
Alicyclobacillus macrosporangiidus
NCBI taxonomy Id: 392015
Other names: A. macrosporangiidus, Alicyclobacillus macrosporangiidus Goto et al. 2007, Alicyclobacillus sp. 5A239-2O-A, DSM 17980, IAM 15370, JCM 21814, strain 5-A239-2O-A
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