STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU62892.1Two-component system, OmpR family, sensor histidine kinase VicK. (566 aa)    
Predicted Functional Partners:
SFU62868.1
Two-component system, OmpR family, response regulator VicR.
 0.978
SFU62925.1
Two-component signal transduction system YycFG, regulatory protein YycH.
 
  
 0.948
SFU72032.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.883
SFU69735.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 0.880
SFU31581.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.878
SFU32360.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 0.876
SFU98449.1
Two-component system, OmpR family, response regulator ResD.
 0.871
SFU30003.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.870
SFU84669.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.870
SFV05938.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.862
Your Current Organism:
Alicyclobacillus macrosporangiidus
NCBI taxonomy Id: 392015
Other names: A. macrosporangiidus, Alicyclobacillus macrosporangiidus Goto et al. 2007, Alicyclobacillus sp. 5A239-2O-A, DSM 17980, IAM 15370, JCM 21814, strain 5-A239-2O-A
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.