Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFU34083.1 | SFU81749.1 | SAMN05421543_101189 | SAMN05421543_10920 | DNA polymerase-1. | Exodeoxyribonuclease X. | 0.655 |
SFU34083.1 | SFU81778.1 | SAMN05421543_101189 | SAMN05421543_10922 | DNA polymerase-1. | AAA domain-containing protein. | 0.625 |
SFU34083.1 | guaB | SAMN05421543_101189 | SAMN05421543_12257 | DNA polymerase-1. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.529 |
SFU34083.1 | mutM | SAMN05421543_101189 | SAMN05421543_102109 | DNA polymerase-1. | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.987 |
SFU34083.1 | polA | SAMN05421543_101189 | SAMN05421543_102110 | DNA polymerase-1. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.946 |
SFU36064.1 | SFU81778.1 | SAMN05421543_101279 | SAMN05421543_10922 | Dynamin family protein. | AAA domain-containing protein. | 0.544 |
SFU36064.1 | guaB | SAMN05421543_101279 | SAMN05421543_12257 | Dynamin family protein. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.534 |
SFU56984.1 | SFU81778.1 | SAMN05421543_10442 | SAMN05421543_10922 | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | AAA domain-containing protein. | 0.639 |
SFU56984.1 | coaD | SAMN05421543_10442 | SAMN05421543_10422 | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.890 |
SFU81749.1 | SFU34083.1 | SAMN05421543_10920 | SAMN05421543_101189 | Exodeoxyribonuclease X. | DNA polymerase-1. | 0.655 |
SFU81749.1 | SFU81778.1 | SAMN05421543_10920 | SAMN05421543_10922 | Exodeoxyribonuclease X. | AAA domain-containing protein. | 0.593 |
SFU81749.1 | SFU81793.1 | SAMN05421543_10920 | SAMN05421543_10923 | Exodeoxyribonuclease X. | Crossover junction endodeoxyribonuclease RusA. | 0.543 |
SFU81749.1 | SFU81808.1 | SAMN05421543_10920 | SAMN05421543_10924 | Exodeoxyribonuclease X. | Hypothetical protein. | 0.535 |
SFU81749.1 | polA | SAMN05421543_10920 | SAMN05421543_102110 | Exodeoxyribonuclease X. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.655 |
SFU81778.1 | SFU34083.1 | SAMN05421543_10922 | SAMN05421543_101189 | AAA domain-containing protein. | DNA polymerase-1. | 0.625 |
SFU81778.1 | SFU36064.1 | SAMN05421543_10922 | SAMN05421543_101279 | AAA domain-containing protein. | Dynamin family protein. | 0.544 |
SFU81778.1 | SFU56984.1 | SAMN05421543_10922 | SAMN05421543_10442 | AAA domain-containing protein. | Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. | 0.639 |
SFU81778.1 | SFU81749.1 | SAMN05421543_10922 | SAMN05421543_10920 | AAA domain-containing protein. | Exodeoxyribonuclease X. | 0.593 |
SFU81778.1 | SFU81793.1 | SAMN05421543_10922 | SAMN05421543_10923 | AAA domain-containing protein. | Crossover junction endodeoxyribonuclease RusA. | 0.773 |
SFU81778.1 | SFU81808.1 | SAMN05421543_10922 | SAMN05421543_10924 | AAA domain-containing protein. | Hypothetical protein. | 0.775 |
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