Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFU91579.1 | SFU91590.1 | SAMN05421543_11346 | SAMN05421543_11347 | Hypothetical protein. | Sporulation integral membrane protein YtvI. | 0.543 |
SFU91579.1 | SFU91602.1 | SAMN05421543_11346 | SAMN05421543_11348 | Hypothetical protein. | Hypothetical protein. | 0.543 |
SFU91590.1 | SFU91579.1 | SAMN05421543_11347 | SAMN05421543_11346 | Sporulation integral membrane protein YtvI. | Hypothetical protein. | 0.543 |
SFU91590.1 | SFU91602.1 | SAMN05421543_11347 | SAMN05421543_11348 | Sporulation integral membrane protein YtvI. | Hypothetical protein. | 0.821 |
SFU91590.1 | SFV06494.1 | SAMN05421543_11347 | SAMN05421543_13013 | Sporulation integral membrane protein YtvI. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.423 |
SFU91590.1 | purE | SAMN05421543_11347 | SAMN05421543_13011 | Sporulation integral membrane protein YtvI. | 5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.433 |
SFU91602.1 | SFU91579.1 | SAMN05421543_11348 | SAMN05421543_11346 | Hypothetical protein. | Hypothetical protein. | 0.543 |
SFU91602.1 | SFU91590.1 | SAMN05421543_11348 | SAMN05421543_11347 | Hypothetical protein. | Sporulation integral membrane protein YtvI. | 0.821 |
SFV06494.1 | SFU91590.1 | SAMN05421543_13013 | SAMN05421543_11347 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Sporulation integral membrane protein YtvI. | 0.423 |
SFV06494.1 | purE | SAMN05421543_13013 | SAMN05421543_13011 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.990 |
purE | SFU91590.1 | SAMN05421543_13011 | SAMN05421543_11347 | 5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | Sporulation integral membrane protein YtvI. | 0.433 |
purE | SFV06494.1 | SAMN05421543_13011 | SAMN05421543_13013 | 5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.990 |