Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFU33259.1 | SFV02534.1 | SAMN05421543_101149 | SAMN05421543_12125 | Hypothetical protein. | Zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. | 0.650 |
SFU37882.1 | SFU39090.1 | SAMN05421543_101368 | SAMN05421543_101425 | 3-hydroxyacyl-CoA dehydrogenase. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.841 |
SFU37882.1 | SFU39156.1 | SAMN05421543_101368 | SAMN05421543_101428 | 3-hydroxyacyl-CoA dehydrogenase. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.841 |
SFU37882.1 | SFU77071.1 | SAMN05421543_101368 | SAMN05421543_107160 | 3-hydroxyacyl-CoA dehydrogenase. | Pyruvate ferredoxin oxidoreductase alpha subunit. | 0.837 |
SFU37882.1 | SFU82629.1 | SAMN05421543_101368 | SAMN05421543_10985 | 3-hydroxyacyl-CoA dehydrogenase. | NADPH:quinone reductase. | 0.765 |
SFU37882.1 | SFU93395.1 | SAMN05421543_101368 | SAMN05421543_11428 | 3-hydroxyacyl-CoA dehydrogenase. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.841 |
SFU37882.1 | SFV02534.1 | SAMN05421543_101368 | SAMN05421543_12125 | 3-hydroxyacyl-CoA dehydrogenase. | Zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. | 0.765 |
SFU37882.1 | SFV10464.1 | SAMN05421543_101368 | SAMN05421543_1891 | 3-hydroxyacyl-CoA dehydrogenase. | Aminoglycoside 6'-N-acetyltransferase. | 0.853 |
SFU39090.1 | SFU37882.1 | SAMN05421543_101425 | SAMN05421543_101368 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 3-hydroxyacyl-CoA dehydrogenase. | 0.841 |
SFU39090.1 | SFU39156.1 | SAMN05421543_101425 | SAMN05421543_101428 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.996 |
SFU39090.1 | SFU77071.1 | SAMN05421543_101425 | SAMN05421543_107160 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Pyruvate ferredoxin oxidoreductase alpha subunit. | 0.999 |
SFU39090.1 | SFU82629.1 | SAMN05421543_101425 | SAMN05421543_10985 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | NADPH:quinone reductase. | 0.664 |
SFU39090.1 | SFU93395.1 | SAMN05421543_101425 | SAMN05421543_11428 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.996 |
SFU39090.1 | SFV02534.1 | SAMN05421543_101425 | SAMN05421543_12125 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. | 0.664 |
SFU39090.1 | SFV10464.1 | SAMN05421543_101425 | SAMN05421543_1891 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Aminoglycoside 6'-N-acetyltransferase. | 0.653 |
SFU39156.1 | SFU37882.1 | SAMN05421543_101428 | SAMN05421543_101368 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 3-hydroxyacyl-CoA dehydrogenase. | 0.841 |
SFU39156.1 | SFU39090.1 | SAMN05421543_101428 | SAMN05421543_101425 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.996 |
SFU39156.1 | SFU77071.1 | SAMN05421543_101428 | SAMN05421543_107160 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Pyruvate ferredoxin oxidoreductase alpha subunit. | 0.999 |
SFU39156.1 | SFU82629.1 | SAMN05421543_101428 | SAMN05421543_10985 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | NADPH:quinone reductase. | 0.664 |
SFU39156.1 | SFU93395.1 | SAMN05421543_101428 | SAMN05421543_11428 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.996 |
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