STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV04683.1Sugar phosphate isomerase/epimerase. (253 aa)    
Predicted Functional Partners:
SFV04715.1
Predicted dehydrogenase.
 
 
 0.915
SFV04738.1
Sugar phosphate isomerase/epimerase.
 
    0.889
SFV04730.1
Predicted dehydrogenase.
 
 
 0.888
SFU37486.1
Oxidoreductase family, NAD-binding Rossmann fold.
 
 
 0.780
SFU78335.1
5-deoxy-glucuronate isomerase.
 
  
 0.745
SFV03228.1
Predicted dehydrogenase.
 
 
 0.707
SFU48030.1
Fructokinase; Belongs to the carbohydrate kinase PfkB family.
  
 
 0.703
SFV01685.1
Predicted dehydrogenase.
 
 
 0.678
SFU48609.1
PTS system, fructose-specific IIC component.
  
 
  0.676
SFV04697.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
 
    0.667
Your Current Organism:
Alicyclobacillus macrosporangiidus
NCBI taxonomy Id: 392015
Other names: A. macrosporangiidus, Alicyclobacillus macrosporangiidus Goto et al. 2007, Alicyclobacillus sp. 5A239-2O-A, DSM 17980, IAM 15370, JCM 21814, strain 5-A239-2O-A
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