STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV05155.1Hypothetical protein. (213 aa)    
Predicted Functional Partners:
SFV05164.1
Protein of unknown function.
 
  
 0.970
SFU75268.1
Flagellar motor switch protein FliN/FliY.
    
 
 0.911
SFV05147.1
Hypothetical protein.
 
    
0.689
SFV05141.1
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
 
     0.587
SFV05251.1
Flagellar protein FliS.
    
 
 0.458
SFU75452.1
Chemotaxis protein CheC.
    
   0.403
SFV01785.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Alicyclobacillus macrosporangiidus
NCBI taxonomy Id: 392015
Other names: A. macrosporangiidus, Alicyclobacillus macrosporangiidus Goto et al. 2007, Alicyclobacillus sp. 5A239-2O-A, DSM 17980, IAM 15370, JCM 21814, strain 5-A239-2O-A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.