STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV07431.1Sarcosine oxidase subunit alpha. (114 aa)    
Predicted Functional Partners:
SFV07438.1
Thioredoxin reductase.
 
 
 0.969
SFV07446.1
Sarcosine oxidase subunit beta.
 
  
  0.953
SFU59057.1
precorrin-8X/cobalt-precorrin-8 methylmutase.
  
 0.919
SFU38209.1
4Fe-4S binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 0.873
SFV01885.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.796
SFV07410.1
iron(III) transport system ATP-binding protein/putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.773
SFV07415.1
Putative spermidine/putrescine transport system permease protein.
       0.773
SFV07423.1
Putative spermidine/putrescine transport system permease protein.
       0.773
SFU77054.1
Pyruvate ferredoxin oxidoreductase gamma subunit.
    
 0.760
SFU77071.1
Pyruvate ferredoxin oxidoreductase alpha subunit.
  
 
 0.757
Your Current Organism:
Alicyclobacillus macrosporangiidus
NCBI taxonomy Id: 392015
Other names: A. macrosporangiidus, Alicyclobacillus macrosporangiidus Goto et al. 2007, Alicyclobacillus sp. 5A239-2O-A, DSM 17980, IAM 15370, JCM 21814, strain 5-A239-2O-A
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