STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV09355.1Protein of unknown function. (313 aa)    
Predicted Functional Partners:
SFV09351.1
Hypothetical protein.
 
     0.917
SFV09580.1
Protein AroM.
 
     0.804
SFV09282.1
Uncharacterized membrane protein, oligopeptide transporter (OPT) family.
 
     0.803
SFV09573.1
Asp/Glu/hydantoin racemase.
 
     0.802
SFV09348.1
Succinyl-diaminopimelate desuccinylase.
 
     0.764
SFV09276.1
Leucyl aminopeptidase (aminopeptidase T).
 
     0.757
SFU86998.1
Energy-coupling factor transport system substrate-specific component.
 
 
 0.584
SFU34126.1
Energy-coupling factor transport system ATP-binding protein.
  
 
 0.546
ecfA-2
Energy-coupling factor transporter ATP-binding protein EcfA; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 
 0.529
SFU85763.1
Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein.
  
 
 0.529
Your Current Organism:
Alicyclobacillus macrosporangiidus
NCBI taxonomy Id: 392015
Other names: A. macrosporangiidus, Alicyclobacillus macrosporangiidus Goto et al. 2007, Alicyclobacillus sp. 5A239-2O-A, DSM 17980, IAM 15370, JCM 21814, strain 5-A239-2O-A
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