STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001718195_00588Unannotated protein. (656 aa)    
Predicted Functional Partners:
GCA_001718195_00773
Unannotated protein.
 
  
 0.800
GCA_001718195_06751
Unannotated protein.
 
  
 0.800
GCA_001718195_02566
Unannotated protein.
    
 
 0.760
GCA_001718195_00702
Unannotated protein.
    
 
 0.755
GCA_001718195_00703
Unannotated protein.
    
 
 0.755
GCA_001718195_01222
Unannotated protein.
    
 
 0.755
GCA_001718195_02567
Unannotated protein.
    
 
 0.755
GCA_001718195_00586
Unannotated protein.
       0.532
GCA_001718195_00587
Unannotated protein.
       0.527
GCA_001718195_03151
Unannotated protein.
  
    0.492
Your Current Organism:
Paraburkholderia nodosa
NCBI taxonomy Id: 392320
Other names: BCRC 17575, Burkholderia nodosa, Burkholderia nodosa Chen et al. 2007, Burkholderia sp. Br3437, Burkholderia sp. Br3461, Burkholderia sp. Br3470, DSM 21604, LMG 23741, LMG:23741, P. nodosa, Paraburkholderia nodosa (Chen et al. 2007) Sawana et al. 2015, strain Br3437
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.