STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001718195_00594Unannotated protein. (377 aa)    
Predicted Functional Partners:
GCA_001718195_04121
Unannotated protein.
   
 
  0.963
GCA_001718195_04998
Unannotated protein.
 
 
 
  0.963
GCA_001718195_06116
Unannotated protein.
  
  0.926
GCA_001718195_04120
Unannotated protein.
 
 0.914
GCA_001718195_00609
Unannotated protein.
 
 0.911
GCA_001718195_00596
Unannotated protein.
 
  0.908
GCA_001718195_02079
Unannotated protein.
 
 0.902
GCA_001718195_03600
Unannotated protein.
 
 0.874
GCA_001718195_03598
Unannotated protein.
   
  0.854
GCA_001718195_07048
Unannotated protein.
   
  0.854
Your Current Organism:
Paraburkholderia nodosa
NCBI taxonomy Id: 392320
Other names: BCRC 17575, Burkholderia nodosa, Burkholderia nodosa Chen et al. 2007, Burkholderia sp. Br3437, Burkholderia sp. Br3461, Burkholderia sp. Br3470, DSM 21604, LMG 23741, LMG:23741, P. nodosa, Paraburkholderia nodosa (Chen et al. 2007) Sawana et al. 2015, strain Br3437
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.