STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001718195_00685Unannotated protein. (360 aa)    
Predicted Functional Partners:
GCA_001718195_00687
Unannotated protein.
 
 
 0.998
GCA_001718195_00688
Unannotated protein.
 
  
  0.993
GCA_001718195_00686
Unannotated protein.
 
 
 0.987
GCA_001718195_05284
Unannotated protein.
 
 
 0.898
GCA_001718195_02591
Unannotated protein.
 
  
  0.857
GCA_001718195_07691
Unannotated protein.
   
   0.849
GCA_001718195_02592
Unannotated protein.
 
  
  0.803
GCA_001718195_02594
Unannotated protein.
  
  
 
0.739
GCA_001718195_00341
Unannotated protein.
  
 
 0.733
GCA_001718195_02593
Unannotated protein.
 
 
 0.703
Your Current Organism:
Paraburkholderia nodosa
NCBI taxonomy Id: 392320
Other names: BCRC 17575, Burkholderia nodosa, Burkholderia nodosa Chen et al. 2007, Burkholderia sp. Br3437, Burkholderia sp. Br3461, Burkholderia sp. Br3470, DSM 21604, LMG 23741, LMG:23741, P. nodosa, Paraburkholderia nodosa (Chen et al. 2007) Sawana et al. 2015, strain Br3437
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.