STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001718195_01003Unannotated protein. (260 aa)    
Predicted Functional Partners:
GCA_001718195_01002
Unannotated protein.
 
  
  0.935
GCA_001718195_06233
Unannotated protein.
  
 0.922
GCA_001718195_04561
Unannotated protein.
  
 0.902
GCA_001718195_01299
Unannotated protein.
   
  0.887
GCA_001718195_03280
Unannotated protein.
    
  0.884
GCA_001718195_04066
Unannotated protein.
    
  0.884
GCA_001718195_03041
Unannotated protein.
  
 0.881
GCA_001718195_01004
Unannotated protein.
 
  
  0.879
GCA_001718195_01700
Unannotated protein.
   
  0.876
GCA_001718195_02054
Unannotated protein.
    
  0.873
Your Current Organism:
Paraburkholderia nodosa
NCBI taxonomy Id: 392320
Other names: BCRC 17575, Burkholderia nodosa, Burkholderia nodosa Chen et al. 2007, Burkholderia sp. Br3437, Burkholderia sp. Br3461, Burkholderia sp. Br3470, DSM 21604, LMG 23741, LMG:23741, P. nodosa, Paraburkholderia nodosa (Chen et al. 2007) Sawana et al. 2015, strain Br3437
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.