Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL28830.1 | SDL28866.1 | SAMN05660860_00245 | SAMN05660860_00246 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Uridine phosphorylase. | 0.998 |
SDL28830.1 | SDL42374.1 | SAMN05660860_00245 | SAMN05660860_00593 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.940 |
SDL28830.1 | SDL46697.1 | SAMN05660860_00245 | SAMN05660860_00705 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | 0.654 |
SDL28830.1 | SDL74614.1 | SAMN05660860_00245 | SAMN05660860_01176 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Dihydroorotate dehydrogenase. | 0.434 |
SDL28830.1 | SDM18530.1 | SAMN05660860_00245 | SAMN05660860_02032 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Adenosine kinase. | 0.582 |
SDL28830.1 | deoB | SAMN05660860_00245 | SAMN05660860_00769 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.743 |
SDL28830.1 | deoC | SAMN05660860_00245 | SAMN05660860_00768 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.907 |
SDL28830.1 | pyrR | SAMN05660860_00245 | SAMN05660860_01932 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.528 |
SDL28830.1 | surE | SAMN05660860_00245 | SAMN05660860_01971 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.902 |
SDL28866.1 | SDL28830.1 | SAMN05660860_00246 | SAMN05660860_00245 | Uridine phosphorylase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.998 |
SDL28866.1 | SDL42374.1 | SAMN05660860_00246 | SAMN05660860_00593 | Uridine phosphorylase. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.913 |
SDL28866.1 | SDL46697.1 | SAMN05660860_00246 | SAMN05660860_00705 | Uridine phosphorylase. | Dihydropyrimidine dehydrogenase (NAD+) subunit PreA. | 0.759 |
SDL28866.1 | SDL74614.1 | SAMN05660860_00246 | SAMN05660860_01176 | Uridine phosphorylase. | Dihydroorotate dehydrogenase. | 0.791 |
SDL28866.1 | SDM18530.1 | SAMN05660860_00246 | SAMN05660860_02032 | Uridine phosphorylase. | Adenosine kinase. | 0.674 |
SDL28866.1 | SDM48061.1 | SAMN05660860_00246 | SAMN05660860_02628 | Uridine phosphorylase. | Glutamate synthase (NADPH) GltB3 subunit. | 0.699 |
SDL28866.1 | deoB | SAMN05660860_00246 | SAMN05660860_00769 | Uridine phosphorylase. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.815 |
SDL28866.1 | deoC | SAMN05660860_00246 | SAMN05660860_00768 | Uridine phosphorylase. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.754 |
SDL28866.1 | pyrR | SAMN05660860_00246 | SAMN05660860_01932 | Uridine phosphorylase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.897 |
SDL28866.1 | surE | SAMN05660860_00246 | SAMN05660860_01971 | Uridine phosphorylase. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.898 |
SDL42374.1 | SDL28830.1 | SAMN05660860_00593 | SAMN05660860_00245 | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.940 |
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