STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL53676.1Predicted RNA-binding protein, contains PUA-like domain. (164 aa)    
Predicted Functional Partners:
SDL53719.1
AsmA protein.
       0.736
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
       0.522
SDM49273.1
polyphosphate:AMP phosphotransferase.
   
    0.501
SDM57812.1
Hypothetical protein.
   
    0.489
SDL76374.1
Molecular chaperone IbpA, HSP20 family; Belongs to the small heat shock protein (HSP20) family.
   
    0.461
SDL76405.1
HSP20 family protein; Belongs to the small heat shock protein (HSP20) family.
   
    0.461
SDL53770.1
Rubrerythrin.
       0.455
SDL36193.1
OmpA family protein.
  
     0.442
Your Current Organism:
Geoalkalibacter ferrihydriticus
NCBI taxonomy Id: 392333
Other names: DSM 17813, Desulfuromonas alkaliphilus, G. ferrihydriticus, Geoalkalibacter ferrihydriticus Zavarzina et al. 2007, VKM B-2401, strain Z-0531
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.