Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL27359.1 | SDL44536.1 | SAMN05660860_00206 | SAMN05660860_00648 | Curved DNA-binding protein. | Plasmid segregation protein ParM. | 0.984 |
SDL27359.1 | SDL74328.1 | SAMN05660860_00206 | SAMN05660860_01170 | Curved DNA-binding protein. | Hypothetical protein. | 0.799 |
SDL27359.1 | SDM55956.1 | SAMN05660860_00206 | SAMN05660860_02751 | Curved DNA-binding protein. | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | 0.942 |
SDL27359.1 | dnaK | SAMN05660860_00206 | SAMN05660860_01249 | Curved DNA-binding protein. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.998 |
SDL44536.1 | SDL27359.1 | SAMN05660860_00648 | SAMN05660860_00206 | Plasmid segregation protein ParM. | Curved DNA-binding protein. | 0.984 |
SDL44536.1 | SDL74328.1 | SAMN05660860_00648 | SAMN05660860_01170 | Plasmid segregation protein ParM. | Hypothetical protein. | 0.781 |
SDL44536.1 | SDL98250.1 | SAMN05660860_00648 | SAMN05660860_01599 | Plasmid segregation protein ParM. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.531 |
SDL44536.1 | SDM34194.1 | SAMN05660860_00648 | SAMN05660860_02353 | Plasmid segregation protein ParM. | Glutamate synthase (NADPH) large subunit. | 0.472 |
SDL44536.1 | SDM55956.1 | SAMN05660860_00648 | SAMN05660860_02751 | Plasmid segregation protein ParM. | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | 0.702 |
SDL74328.1 | SDL27359.1 | SAMN05660860_01170 | SAMN05660860_00206 | Hypothetical protein. | Curved DNA-binding protein. | 0.799 |
SDL74328.1 | SDL44536.1 | SAMN05660860_01170 | SAMN05660860_00648 | Hypothetical protein. | Plasmid segregation protein ParM. | 0.781 |
SDL74328.1 | SDL98250.1 | SAMN05660860_01170 | SAMN05660860_01599 | Hypothetical protein. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.882 |
SDL74328.1 | SDM03829.1 | SAMN05660860_01170 | SAMN05660860_01758 | Hypothetical protein. | Chorismate mutase. | 0.883 |
SDL74328.1 | SDM34194.1 | SAMN05660860_01170 | SAMN05660860_02353 | Hypothetical protein. | Glutamate synthase (NADPH) large subunit. | 0.942 |
SDL74328.1 | SDM48061.1 | SAMN05660860_01170 | SAMN05660860_02628 | Hypothetical protein. | Glutamate synthase (NADPH) GltB3 subunit. | 0.909 |
SDL74328.1 | SDM55956.1 | SAMN05660860_01170 | SAMN05660860_02751 | Hypothetical protein. | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | 0.861 |
SDL74328.1 | dnaK | SAMN05660860_01170 | SAMN05660860_01249 | Hypothetical protein. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.781 |
SDL74328.1 | mtaD | SAMN05660860_01170 | SAMN05660860_01171 | Hypothetical protein. | 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family. | 0.866 |
SDL74328.1 | panC | SAMN05660860_01170 | SAMN05660860_02965 | Hypothetical protein. | Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.767 |
SDL98250.1 | SDL44536.1 | SAMN05660860_01599 | SAMN05660860_00648 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | Plasmid segregation protein ParM. | 0.531 |
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