Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL48899.1 | SDL98722.1 | SAMN05660860_00760 | SAMN05660860_01612 | Recombination protein MgsA. | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | 0.719 |
SDL98646.1 | SDL98680.1 | SAMN05660860_01610 | SAMN05660860_01611 | Menaquinone-dependent protoporphyrinogen oxidase. | Hypothetical protein. | 0.752 |
SDL98646.1 | SDL98722.1 | SAMN05660860_01610 | SAMN05660860_01612 | Menaquinone-dependent protoporphyrinogen oxidase. | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | 0.542 |
SDL98680.1 | SDL98646.1 | SAMN05660860_01611 | SAMN05660860_01610 | Hypothetical protein. | Menaquinone-dependent protoporphyrinogen oxidase. | 0.752 |
SDL98680.1 | SDL98722.1 | SAMN05660860_01611 | SAMN05660860_01612 | Hypothetical protein. | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | 0.556 |
SDL98680.1 | SDM45367.1 | SAMN05660860_01611 | SAMN05660860_02558 | Hypothetical protein. | ADP-ribosyl-[dinitrogen reductase] hydrolase. | 0.723 |
SDL98722.1 | SDL48899.1 | SAMN05660860_01612 | SAMN05660860_00760 | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | Recombination protein MgsA. | 0.719 |
SDL98722.1 | SDL98646.1 | SAMN05660860_01612 | SAMN05660860_01610 | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | Menaquinone-dependent protoporphyrinogen oxidase. | 0.542 |
SDL98722.1 | SDL98680.1 | SAMN05660860_01612 | SAMN05660860_01611 | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | Hypothetical protein. | 0.556 |
SDL98722.1 | SDM44266.1 | SAMN05660860_01612 | SAMN05660860_02530 | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | Rhodanese-related sulfurtransferase. | 0.639 |
SDL98722.1 | SDM45367.1 | SAMN05660860_01612 | SAMN05660860_02558 | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | ADP-ribosyl-[dinitrogen reductase] hydrolase. | 0.785 |
SDL98722.1 | SDM47840.1 | SAMN05660860_01612 | SAMN05660860_02622 | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | Acetoin utilization deacetylase AcuC. | 0.471 |
SDL98722.1 | SDM58718.1 | SAMN05660860_01612 | SAMN05660860_02822 | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | Nucleotidyltransferase. | 0.450 |
SDL98722.1 | SDM66764.1 | SAMN05660860_01612 | SAMN05660860_02969 | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | Acetoin utilization protein AcuC. | 0.471 |
SDL98722.1 | SDM92675.1 | SAMN05660860_01612 | SAMN05660860_03404 | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | Metallo-beta-lactamase family protein. | 0.407 |
SDL98722.1 | cmk | SAMN05660860_01612 | SAMN05660860_01761 | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | Cytidylate kinase. | 0.639 |
SDM44266.1 | SDL98722.1 | SAMN05660860_02530 | SAMN05660860_01612 | Rhodanese-related sulfurtransferase. | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | 0.639 |
SDM44266.1 | SDM58718.1 | SAMN05660860_02530 | SAMN05660860_02822 | Rhodanese-related sulfurtransferase. | Nucleotidyltransferase. | 0.551 |
SDM45367.1 | SDL98680.1 | SAMN05660860_02558 | SAMN05660860_01611 | ADP-ribosyl-[dinitrogen reductase] hydrolase. | Hypothetical protein. | 0.723 |
SDM45367.1 | SDL98722.1 | SAMN05660860_02558 | SAMN05660860_01612 | ADP-ribosyl-[dinitrogen reductase] hydrolase. | O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain. | 0.785 |
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