Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDL97061.1 | SDM02007.1 | SAMN05660860_01569 | SAMN05660860_01702 | Signal transduction histidine kinase. | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.787 |
| SDL97061.1 | SDM15987.1 | SAMN05660860_01569 | SAMN05660860_01953 | Signal transduction histidine kinase. | HPt (histidine-containing phosphotransfer) domain-containing protein. | 0.999 |
| SDL97061.1 | SDM19973.1 | SAMN05660860_01569 | SAMN05660860_02073 | Signal transduction histidine kinase. | Two-component system, chemotaxis family, CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
| SDL97061.1 | SDM20713.1 | SAMN05660860_01569 | SAMN05660860_02094 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
| SDL97061.1 | SDM23369.1 | SAMN05660860_01569 | SAMN05660860_02165 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
| SDL97061.1 | SDM32873.1 | SAMN05660860_01569 | SAMN05660860_02313 | Signal transduction histidine kinase. | Two-component system, NtrC family, response regulator HydG. | 0.772 |
| SDL97061.1 | SDM32908.1 | SAMN05660860_01569 | SAMN05660860_02314 | Signal transduction histidine kinase. | Two-component system, NtrC family, sensor histidine kinase HydH. | 0.978 |
| SDL97061.1 | SDM46335.1 | SAMN05660860_01569 | SAMN05660860_02583 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
| SDL97061.1 | SDM65019.1 | SAMN05660860_01569 | SAMN05660860_02920 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.978 |
| SDL97061.1 | SDM88672.1 | SAMN05660860_01569 | SAMN05660860_03332 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
| SDM02007.1 | SDL97061.1 | SAMN05660860_01702 | SAMN05660860_01569 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Signal transduction histidine kinase. | 0.787 |
| SDM02007.1 | SDM15987.1 | SAMN05660860_01702 | SAMN05660860_01953 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | HPt (histidine-containing phosphotransfer) domain-containing protein. | 0.762 |
| SDM02007.1 | SDM19973.1 | SAMN05660860_01702 | SAMN05660860_02073 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component system, chemotaxis family, CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.781 |
| SDM02007.1 | SDM20713.1 | SAMN05660860_01702 | SAMN05660860_02094 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PAS domain S-box-containing protein. | 0.730 |
| SDM02007.1 | SDM23369.1 | SAMN05660860_01702 | SAMN05660860_02165 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PAS domain S-box-containing protein. | 0.730 |
| SDM02007.1 | SDM32873.1 | SAMN05660860_01702 | SAMN05660860_02313 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component system, NtrC family, response regulator HydG. | 0.818 |
| SDM02007.1 | SDM32908.1 | SAMN05660860_01702 | SAMN05660860_02314 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component system, NtrC family, sensor histidine kinase HydH. | 0.416 |
| SDM02007.1 | SDM46335.1 | SAMN05660860_01702 | SAMN05660860_02583 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PAS domain S-box-containing protein. | 0.829 |
| SDM02007.1 | SDM65019.1 | SAMN05660860_01702 | SAMN05660860_02920 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Signal transduction histidine kinase. | 0.416 |
| SDM02007.1 | SDM88672.1 | SAMN05660860_01702 | SAMN05660860_03332 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PAS domain S-box-containing protein. | 0.748 |
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