Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDL23578.1 | SDL65420.1 | SAMN05660860_00112 | SAMN05660860_00928 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.468 |
SDL23578.1 | SDL93807.1 | SAMN05660860_00112 | SAMN05660860_01481 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | NAD-dependent protein deacetylase, SIR2 family. | 0.722 |
SDL23578.1 | SDM41869.1 | SAMN05660860_00112 | SAMN05660860_02466 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | NAD+ diphosphatase. | 0.914 |
SDL23578.1 | nadE | SAMN05660860_00112 | SAMN05660860_02411 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.860 |
SDL23578.1 | nadK | SAMN05660860_00112 | SAMN05660860_00761 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.606 |
SDL23578.1 | rsfS | SAMN05660860_00112 | SAMN05660860_02597 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). Belongs to the Iojap/RsfS family. | 0.961 |
SDL65420.1 | SDL23578.1 | SAMN05660860_00928 | SAMN05660860_00112 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.468 |
SDL65420.1 | SDM34194.1 | SAMN05660860_00928 | SAMN05660860_02353 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Glutamate synthase (NADPH) large subunit. | 0.958 |
SDL65420.1 | SDM48061.1 | SAMN05660860_00928 | SAMN05660860_02628 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Glutamate synthase (NADPH) GltB3 subunit. | 0.980 |
SDL65420.1 | SDM64655.1 | SAMN05660860_00928 | SAMN05660860_02910 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Allosteric NADP-dependent malic enzyme. | 0.963 |
SDL65420.1 | nadE | SAMN05660860_00928 | SAMN05660860_02411 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.926 |
SDL93807.1 | SDL23578.1 | SAMN05660860_01481 | SAMN05660860_00112 | NAD-dependent protein deacetylase, SIR2 family. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.722 |
SDL93807.1 | SDM34578.1 | SAMN05660860_01481 | SAMN05660860_02364 | NAD-dependent protein deacetylase, SIR2 family. | Hypothetical protein. | 0.714 |
SDL93807.1 | SDM41869.1 | SAMN05660860_01481 | SAMN05660860_02466 | NAD-dependent protein deacetylase, SIR2 family. | NAD+ diphosphatase. | 0.560 |
SDL93807.1 | SDM64655.1 | SAMN05660860_01481 | SAMN05660860_02910 | NAD-dependent protein deacetylase, SIR2 family. | Allosteric NADP-dependent malic enzyme. | 0.575 |
SDL93807.1 | nadE | SAMN05660860_01481 | SAMN05660860_02411 | NAD-dependent protein deacetylase, SIR2 family. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.915 |
SDL93807.1 | nadK | SAMN05660860_01481 | SAMN05660860_00761 | NAD-dependent protein deacetylase, SIR2 family. | NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.608 |
SDL93807.1 | rsfS | SAMN05660860_01481 | SAMN05660860_02597 | NAD-dependent protein deacetylase, SIR2 family. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). Belongs to the Iojap/RsfS family. | 0.693 |
SDM34194.1 | SDL65420.1 | SAMN05660860_02353 | SAMN05660860_00928 | Glutamate synthase (NADPH) large subunit. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.958 |
SDM34194.1 | SDM34578.1 | SAMN05660860_02353 | SAMN05660860_02364 | Glutamate synthase (NADPH) large subunit. | Hypothetical protein. | 0.492 |
page 1 of 4