STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM93126.1Hypothetical protein. (286 aa)    
Predicted Functional Partners:
SDL65420.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.944
SDM64655.1
Allosteric NADP-dependent malic enzyme.
    
 0.858
znuC
Zinc transport system ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
  
    0.581
SDL71975.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.525
SDL43504.1
2-oxoglutarate ferredoxin oxidoreductase, gamma subunit.
  
  
 0.522
SDM93047.1
Transcriptional modulator of MazE/toxin, MazF.
       0.516
SDM93095.1
Protein of unknown function.
       0.516
SDL45615.1
Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
     
 0.514
SDM46635.1
Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
  0.500
SDM93156.1
Zinc transport system permease protein.
  
    0.495
Your Current Organism:
Geoalkalibacter ferrihydriticus
NCBI taxonomy Id: 392333
Other names: DSM 17813, Desulfuromonas alkaliphilus, G. ferrihydriticus, Geoalkalibacter ferrihydriticus Zavarzina et al. 2007, VKM B-2401, strain Z-0531
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.