STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APU70371.1Hypothetical protein. (355 aa)    
Predicted Functional Partners:
APU70369.1
Hypothetical protein.
 
 
 0.999
APU70368.1
Hypothetical protein.
 
 
 0.998
APU70370.1
Fe(3+) ions import ATP-binding protein FbpC; Belongs to the ABC transporter superfamily.
 
 
 0.998
ade
Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
 
  
 0.946
APU70367.1
Hypothetical protein.
       0.564
topA
DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
     
 0.523
APU71571.1
Hypothetical protein.
     
 0.480
APU70374.1
Hypothetical protein.
       0.441
APU70373.1
UvrABC system protein A.
       0.437
Your Current Organism:
Lactobacillus crustorum
NCBI taxonomy Id: 392416
Other names: CCUG 53174, JCM 15951, L. crustorum, LMG 23699, LMG:23699, Lactobacillus crustorum Scheirlinck et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.