STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APU70427.1Zinc import ATP-binding protein ZnuC. (222 aa)    
Predicted Functional Partners:
APU70428.1
Hypothetical protein.
 
 
 0.972
APU70426.1
Hypothetical protein.
 
  
 0.926
APU72460.1
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 
    
0.902
APU72253.1
Hypothetical protein.
 
 
 0.881
APU72310.1
Manganese transport system membrane protein MntC.
 
 0.791
APU72251.1
Hypothetical protein; Belongs to the bacterial solute-binding protein 9 family.
  
 0.705
APU70429.1
Cell wall teichoic acid glycosylation protein GtcA.
  
    0.521
APU71404.1
Nod factor export ATP-binding protein I.
 
    0.518
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
     0.502
APU72309.1
Metal ABC transporter substrate-binding lipoprotein; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.496
Your Current Organism:
Lactobacillus crustorum
NCBI taxonomy Id: 392416
Other names: CCUG 53174, JCM 15951, L. crustorum, LMG 23699, LMG:23699, Lactobacillus crustorum Scheirlinck et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.