STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APU71116.1Signal transduction histidine-protein kinase ArlS. (364 aa)    
Predicted Functional Partners:
APU71115.1
Response regulator ArlR.
 
 0.983
APU70512.1
Transcriptional regulatory protein YycF.
 
 0.883
rrp2_2
Response regulator ArlR.
 
 0.878
APU72256.1
Hypothetical protein.
 
 0.867
APU71847.1
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP.
 
 0.860
APU70418.1
Transcriptional regulatory protein ResD.
 
 0.858
APU71035.1
Hypothetical protein.
 
 0.857
APU71757.1
Transcriptional regulatory protein CiaR.
 
 0.845
APU70823.1
Hypothetical protein.
 
 
 0.748
APU71899.1
Sensory transduction protein BceR.
 
 0.692
Your Current Organism:
Lactobacillus crustorum
NCBI taxonomy Id: 392416
Other names: CCUG 53174, JCM 15951, L. crustorum, LMG 23699, LMG:23699, Lactobacillus crustorum Scheirlinck et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.