STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pts32BCPTS system EIIBC component. (490 aa)    
Predicted Functional Partners:
APU71412.1
Putative phosphotransferase enzyme IIA component YpqE.
 
 0.986
APU71408.1
Hypothetical protein.
 
     0.947
APU71548.1
Glucose-specific phosphotransferase enzyme IIA component.
 
 0.942
ptsH
Phosphocarrier protein HPr.
  
 
 0.911
murQ2
N-acetylmuramic acid 6-phosphate etherase 2; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
 0.897
APU71411.1
Hypothetical protein.
 
  
 0.875
APU70825.1
PTS system N-acetylglucosamine-specific EIICBA component.
 
 
 0.586
APU71496.1
Hypothetical protein.
  
  
 0.566
APU71497.1
PTS system fructose-specific EIIABC component.
  
  
 0.554
APU70806.1
Hypothetical protein.
 
 
0.544
Your Current Organism:
Lactobacillus crustorum
NCBI taxonomy Id: 392416
Other names: CCUG 53174, JCM 15951, L. crustorum, LMG 23699, LMG:23699, Lactobacillus crustorum Scheirlinck et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.