Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APU70919.1 | APU71835.1 | BI355_0567 | BI355_1530 | Thioredoxin; Belongs to the thioredoxin family. | Thioredoxin reductase. | 0.880 |
APU70919.1 | APU72075.1 | BI355_0567 | BI355_1776 | Thioredoxin; Belongs to the thioredoxin family. | Putative thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | 0.522 |
APU70919.1 | ahpC | BI355_0567 | BI355_0932 | Thioredoxin; Belongs to the thioredoxin family. | Alkyl hydroperoxide reductase subunit C. | 0.579 |
APU70919.1 | trxA_2 | BI355_0567 | BI355_0764 | Thioredoxin; Belongs to the thioredoxin family. | Thioredoxin-like protein YtpP. | 0.579 |
APU71833.1 | APU71835.1 | BI355_1528 | BI355_1530 | Phosphoglucomutase. | Thioredoxin reductase. | 0.605 |
APU71833.1 | APU71838.1 | BI355_1528 | BI355_1533 | Phosphoglucomutase. | Hypothetical protein. | 0.435 |
APU71833.1 | hprK | BI355_1528 | BI355_1532 | Phosphoglucomutase. | HPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon [...] | 0.517 |
APU71833.1 | lgt | BI355_1528 | BI355_1531 | Phosphoglucomutase. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.460 |
APU71835.1 | APU70919.1 | BI355_1530 | BI355_0567 | Thioredoxin reductase. | Thioredoxin; Belongs to the thioredoxin family. | 0.880 |
APU71835.1 | APU71833.1 | BI355_1530 | BI355_1528 | Thioredoxin reductase. | Phosphoglucomutase. | 0.605 |
APU71835.1 | APU71838.1 | BI355_1530 | BI355_1533 | Thioredoxin reductase. | Hypothetical protein. | 0.591 |
APU71835.1 | APU72075.1 | BI355_1530 | BI355_1776 | Thioredoxin reductase. | Putative thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | 0.619 |
APU71835.1 | APU72244.1 | BI355_1530 | BI355_1945 | Thioredoxin reductase. | Thioredoxin; Belongs to the thioredoxin family. | 0.758 |
APU71835.1 | ahpC | BI355_1530 | BI355_0932 | Thioredoxin reductase. | Alkyl hydroperoxide reductase subunit C. | 0.762 |
APU71835.1 | hprK | BI355_1530 | BI355_1532 | Thioredoxin reductase. | HPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon [...] | 0.773 |
APU71835.1 | lgt | BI355_1530 | BI355_1531 | Thioredoxin reductase. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.735 |
APU71835.1 | sufS | BI355_1530 | BI355_0088 | Thioredoxin reductase. | Cysteine desulfurase SufS; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.917 |
APU71835.1 | trxA_2 | BI355_1530 | BI355_0764 | Thioredoxin reductase. | Thioredoxin-like protein YtpP. | 0.627 |
APU71838.1 | APU71833.1 | BI355_1533 | BI355_1528 | Hypothetical protein. | Phosphoglucomutase. | 0.435 |
APU71838.1 | APU71835.1 | BI355_1533 | BI355_1530 | Hypothetical protein. | Thioredoxin reductase. | 0.591 |
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