STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APU71938.1Hypothetical protein. (314 aa)    
Predicted Functional Partners:
APU71935.1
Citrate ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
 
    0.792
citD
Citrate lyase acyl carrier protein; Covalent carrier of the coenzyme of citrate lyase.
 
    0.779
citX
Hypothetical protein.
 
     0.761
citF
Citrate lyase alpha chain.
 
    0.734
citG
Putative 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase.
 
     0.722
APU71937.1
NAD-dependent malic enzyme.
 
    0.620
citE
Citrate lyase subunit beta; Belongs to the HpcH/HpaI aldolase family.
 
    0.619
cimH
Citrate/malate transporter.
 
     0.593
APU70467.1
Hypothetical protein.
  
     0.457
APU70443.1
Hypothetical protein.
  
     0.407
Your Current Organism:
Lactobacillus crustorum
NCBI taxonomy Id: 392416
Other names: CCUG 53174, JCM 15951, L. crustorum, LMG 23699, LMG:23699, Lactobacillus crustorum Scheirlinck et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.