STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APU72259.1Putative aliphatic sulfonates transport permease protein SsuC. (218 aa)    
Predicted Functional Partners:
APU72260.1
Aliphatic sulfonates import ATP-binding protein SsuB.
 
 0.999
APU72265.1
Hypothetical protein.
 
 0.997
APU72138.1
Hypothetical protein.
 
  
 0.762
APU72267.1
Hypothetical protein.
 
     0.679
APU72258.1
Hypothetical protein.
 
    0.649
ecfA
Energy-coupling factor transporter ATP-binding protein EcfA1; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
 0.542
APU70370.1
Fe(3+) ions import ATP-binding protein FbpC; Belongs to the ABC transporter superfamily.
   
  0.466
APU72266.1
Hypothetical protein.
 
    0.464
Your Current Organism:
Lactobacillus crustorum
NCBI taxonomy Id: 392416
Other names: CCUG 53174, JCM 15951, L. crustorum, LMG 23699, LMG:23699, Lactobacillus crustorum Scheirlinck et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.