STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APU72425.1Hypothetical protein. (378 aa)    
Predicted Functional Partners:
APU72426.1
Hypothetical protein.
 
 0.999
APU72427.1
Hypothetical protein.
 
 
 0.991
APU71460.1
Putative hemin import ATP-binding protein HrtA.
 
 0.986
APU72113.1
Putative hemin import ATP-binding protein HrtA.
 
 0.984
APU71898.1
Bacitracin export ATP-binding protein BceA.
 
 0.973
APU72434.1
Bacitracin export ATP-binding protein BceA.
 
 0.973
APU72188.1
Putative ABC transporter ATP-binding protein.
 
 0.967
metN1
Methionine import ATP-binding protein MetN 1; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     0.918
APU72432.1
Glutamine transport ATP-binding protein GlnQ.
      0.917
APU72260.1
Aliphatic sulfonates import ATP-binding protein SsuB.
 
     0.914
Your Current Organism:
Lactobacillus crustorum
NCBI taxonomy Id: 392416
Other names: CCUG 53174, JCM 15951, L. crustorum, LMG 23699, LMG:23699, Lactobacillus crustorum Scheirlinck et al. 2007
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