STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APU72449.1Hypothetical protein. (430 aa)    
Predicted Functional Partners:
abpR
Hypothetical protein.
 
 
 0.997
plnC
Hypothetical protein.
 
 
 0.989
APU71908.1
Hypothetical protein.
  
  
0.931
APU72450.1
Hypothetical protein.
 
    
0.758
APU71957.1
Hypothetical protein.
  
     0.574
APU70443.1
Hypothetical protein.
  
    0.539
APU72277.1
Hypothetical protein.
  
     0.523
APU71413.1
Hypothetical protein; Belongs to the 'phage' integrase family.
  
     0.516
APU72448.1
Hypothetical protein.
       0.516
APU72452.1
Hypothetical protein.
       0.486
Your Current Organism:
Lactobacillus crustorum
NCBI taxonomy Id: 392416
Other names: CCUG 53174, JCM 15951, L. crustorum, LMG 23699, LMG:23699, Lactobacillus crustorum Scheirlinck et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.