STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET48722.1Cysteine-rich secretory protein family protein. (414 aa)    
Predicted Functional Partners:
SET94524.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family /amino acid/amide ABC transporter membrane protein 2, HAAT family.
   
  0.884
SET41217.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
    
  0.678
SET68929.1
Phosphoenolpyruvate carboxykinase (ATP).
 
  
  0.666
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
    
  0.578
SET06328.1
Malate dehydrogenase (quinone).
    
  0.572
SET38861.1
Malate dehydrogenase (NAD); Belongs to the LDH/MDH superfamily.
     
 0.563
SEU01972.1
Subtilase family protein; Belongs to the peptidase S8 family.
  
  
 0.549
SEU06553.1
Subtilase family protein; Belongs to the peptidase S8 family.
  
  
 0.545
SEU15466.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
  
 0.541
radB
DNA repair protein RadB; Involved in DNA repair and in homologous recombination. May regulate the cleavage reactions of the branch-structured DNA. Has a very weak ATPase activity that is not stimulated by DNA. Binds DNA but does not promote DNA strands exchange.
   
   0.503
Your Current Organism:
Haloterrigena hispanica
NCBI taxonomy Id: 392421
Other names: DSM 18328, H. hispanica, Haloterrigena hispanica Romano et al. 2007, Haloterrigena sp. FP1, strain FP1
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