STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET56390.1Cupin domain protein. (112 aa)    
Predicted Functional Partners:
SEU05556.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
 0.671
SET56422.1
Manganese transport protein.
 
     0.667
SET98709.1
Alkylhydroperoxidase AhpD family core domain-containing protein.
    
 0.631
SET56358.1
Hypothetical protein.
       0.620
SET95000.1
Hypothetical protein.
 
  
  0.601
SET37449.1
Hypothetical protein.
 
  
  0.596
SET93400.1
Cupin domain-containing protein.
 
  0.593
SES66892.1
Cupin domain-containing protein.
 
  0.584
SET41942.1
Prephenate dehydratase.
  
 
 0.561
SET38588.1
Hypothetical protein.
    
  0.535
Your Current Organism:
Haloterrigena hispanica
NCBI taxonomy Id: 392421
Other names: DSM 18328, H. hispanica, Haloterrigena hispanica Romano et al. 2007, Haloterrigena sp. FP1, strain FP1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.