STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET54085.1Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat. (380 aa)    
Predicted Functional Partners:
SET28261.1
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat.
  
     0.697
SET00608.1
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat.
  
     0.594
SET92388.1
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat.
  
     0.573
SET16940.1
Solute carrier family 34 (sodium-dependent phosphate cotransporter).
  
     0.572
SEU13305.1
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat.
  
     0.509
SET92804.1
Outer membrane protein assembly factor BamB.
  
     0.492
SET98873.1
Pentapeptide repeat-containing protein.
  
     0.492
SET50122.1
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat.
  
     0.491
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
 
 
  0.443
Your Current Organism:
Haloterrigena hispanica
NCBI taxonomy Id: 392421
Other names: DSM 18328, H. hispanica, Haloterrigena hispanica Romano et al. 2007, Haloterrigena sp. FP1, strain FP1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.