STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEU03626.1Predicted phosphohydrolase or phosphomutase, AlkP superfamily. (531 aa)    
Predicted Functional Partners:
SEU03637.1
Hypothetical protein.
       0.732
SET85425.1
HEAT-like repeat-containing protein.
  
     0.477
SEU03662.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
     0.459
SEU03602.1
Arylsulfatase.
 
     0.448
SET47184.1
Arylsulfatase A.
 
     0.427
SEU03651.1
Predicted dehydrogenase.
       0.404
Your Current Organism:
Haloterrigena hispanica
NCBI taxonomy Id: 392421
Other names: DSM 18328, H. hispanica, Haloterrigena hispanica Romano et al. 2007, Haloterrigena sp. FP1, strain FP1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.