Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LP43_0077 | LP43_0078 | LP43_0077 | LP43_0078 | DNA repair protein RadC; Belongs to the UPF0758 family. | TonB-dependent receptor. | 0.535 |
LP43_0077 | LP43_0079 | LP43_0077 | LP43_0079 | DNA repair protein RadC; Belongs to the UPF0758 family. | Iron-uptake factor PiuB. | 0.535 |
LP43_0078 | LP43_0077 | LP43_0078 | LP43_0077 | TonB-dependent receptor. | DNA repair protein RadC; Belongs to the UPF0758 family. | 0.535 |
LP43_0078 | LP43_0079 | LP43_0078 | LP43_0079 | TonB-dependent receptor. | Iron-uptake factor PiuB. | 0.869 |
LP43_0078 | LP43_0496 | LP43_0078 | LP43_0496 | TonB-dependent receptor. | Ferric siderophore transport system, periplasmic binding protein TonB. | 0.753 |
LP43_0078 | LP43_0595 | LP43_0078 | LP43_0595 | TonB-dependent receptor. | Hypothetical protein. | 0.836 |
LP43_0078 | LP43_0822 | LP43_0078 | LP43_0822 | TonB-dependent receptor. | Ferric siderophore transport system, periplasmic binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.784 |
LP43_0078 | LP43_1624 | LP43_0078 | LP43_1624 | TonB-dependent receptor. | Iron-uptake factor PiuC. | 0.452 |
LP43_0078 | LP43_1625 | LP43_0078 | LP43_1625 | TonB-dependent receptor. | TonB-dependent receptor. | 0.449 |
LP43_0078 | LP43_1626 | LP43_0078 | LP43_1626 | TonB-dependent receptor. | Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.753 |
LP43_0078 | LP43_1972 | LP43_0078 | LP43_1972 | TonB-dependent receptor. | TonB-dependent receptor. | 0.579 |
LP43_0078 | tolA | LP43_0078 | LP43_0008 | TonB-dependent receptor. | TolA protein. | 0.753 |
LP43_0079 | LP43_0077 | LP43_0079 | LP43_0077 | Iron-uptake factor PiuB. | DNA repair protein RadC; Belongs to the UPF0758 family. | 0.535 |
LP43_0079 | LP43_0078 | LP43_0079 | LP43_0078 | Iron-uptake factor PiuB. | TonB-dependent receptor. | 0.869 |
LP43_0496 | LP43_0078 | LP43_0496 | LP43_0078 | Ferric siderophore transport system, periplasmic binding protein TonB. | TonB-dependent receptor. | 0.753 |
LP43_0496 | LP43_1972 | LP43_0496 | LP43_1972 | Ferric siderophore transport system, periplasmic binding protein TonB. | TonB-dependent receptor. | 0.825 |
LP43_0595 | LP43_0078 | LP43_0595 | LP43_0078 | Hypothetical protein. | TonB-dependent receptor. | 0.836 |
LP43_0822 | LP43_0078 | LP43_0822 | LP43_0078 | Ferric siderophore transport system, periplasmic binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | TonB-dependent receptor. | 0.784 |
LP43_0822 | LP43_1972 | LP43_0822 | LP43_1972 | Ferric siderophore transport system, periplasmic binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | TonB-dependent receptor. | 0.841 |
LP43_1624 | LP43_0078 | LP43_1624 | LP43_0078 | Iron-uptake factor PiuC. | TonB-dependent receptor. | 0.452 |
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