Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LP43_0158 | LP43_0161 | LP43_0158 | LP43_0161 | Biotin carboxylase of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | DNA-binding protein Fis; Belongs to the transcriptional regulatory Fis family. | 0.817 |
LP43_0158 | LP43_0163 | LP43_0158 | LP43_0163 | Biotin carboxylase of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Adenylate cyclase. | 0.633 |
LP43_0158 | dusB | LP43_0158 | LP43_0160 | Biotin carboxylase of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | tRNA dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily. | 0.872 |
LP43_0158 | prmA | LP43_0158 | LP43_0159 | Biotin carboxylase of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.825 |
LP43_0158 | purH | LP43_0158 | LP43_0162 | Biotin carboxylase of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | IMP cyclohydrolase/Phosphoribosylaminoimidazolecarboxamide formyltransferase. | 0.714 |
LP43_0161 | LP43_0158 | LP43_0161 | LP43_0158 | DNA-binding protein Fis; Belongs to the transcriptional regulatory Fis family. | Biotin carboxylase of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.817 |
LP43_0161 | LP43_0163 | LP43_0161 | LP43_0163 | DNA-binding protein Fis; Belongs to the transcriptional regulatory Fis family. | Adenylate cyclase. | 0.637 |
LP43_0161 | dusB | LP43_0161 | LP43_0160 | DNA-binding protein Fis; Belongs to the transcriptional regulatory Fis family. | tRNA dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily. | 0.975 |
LP43_0161 | prmA | LP43_0161 | LP43_0159 | DNA-binding protein Fis; Belongs to the transcriptional regulatory Fis family. | Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.819 |
LP43_0161 | purH | LP43_0161 | LP43_0162 | DNA-binding protein Fis; Belongs to the transcriptional regulatory Fis family. | IMP cyclohydrolase/Phosphoribosylaminoimidazolecarboxamide formyltransferase. | 0.714 |
LP43_0163 | LP43_0158 | LP43_0163 | LP43_0158 | Adenylate cyclase. | Biotin carboxylase of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.633 |
LP43_0163 | LP43_0161 | LP43_0163 | LP43_0161 | Adenylate cyclase. | DNA-binding protein Fis; Belongs to the transcriptional regulatory Fis family. | 0.637 |
LP43_0163 | LP43_0165 | LP43_0163 | LP43_0165 | Adenylate cyclase. | Hypothetical protein. | 0.701 |
LP43_0163 | LP43_0293 | LP43_0163 | LP43_0293 | Adenylate cyclase. | Pentapeptide repeat domain protein. | 0.735 |
LP43_0163 | LP43_0888 | LP43_0163 | LP43_0888 | Adenylate cyclase. | Hypothetical protein. | 0.663 |
LP43_0163 | LP43_1365 | LP43_0163 | LP43_1365 | Adenylate cyclase. | Cyclic AMP receptor protein. | 0.817 |
LP43_0163 | LP43_2419 | LP43_0163 | LP43_2419 | Adenylate cyclase. | Hypothetical protein. | 0.688 |
LP43_0163 | dusB | LP43_0163 | LP43_0160 | Adenylate cyclase. | tRNA dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily. | 0.677 |
LP43_0163 | prmA | LP43_0163 | LP43_0159 | Adenylate cyclase. | Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.633 |
LP43_0163 | purH | LP43_0163 | LP43_0162 | Adenylate cyclase. | IMP cyclohydrolase/Phosphoribosylaminoimidazolecarboxamide formyltransferase. | 0.747 |
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