LP43_0258 protein (Methylophaga thiooxydans)

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LP43_0258

Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (132 aa)

Predicted Functional Partners:

LP43_0257

0.958

pyrB

0.884

LP43_0261

0.843

LP43_0259

0.840

LP43_0252

0.740

LP43_0256

0.727

LP43_0262

0.718

LP43_0263

0.718

LP43_0254

0.714

LP43_0253

0.712

Your Current Organism:

Methylophaga thiooxydans

NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LP43_0252	LP43_0253	LP43_0252	LP43_0253	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	Putative proline rich signal peptide protein.	0.834
LP43_0252	LP43_0254	LP43_0252	LP43_0254	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	Nitrogen regulation protein NtrY.	0.834
LP43_0252	LP43_0256	LP43_0252	LP43_0256	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	Trk system potassium uptake protein TrkA.	0.947
LP43_0252	LP43_0257	LP43_0252	LP43_0257	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	Protein YqgE; Belongs to the UPF0301 (AlgH) family.	0.762
LP43_0252	LP43_0258	LP43_0252	LP43_0258	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.	0.740
LP43_0252	LP43_0259	LP43_0252	LP43_0259	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	Uracil phosphoribosyltransferase/Pyrimidine operon regulatory protein PyrR.	0.775
LP43_0252	LP43_0261	LP43_0252	LP43_0261	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	Dihydroorotase.	0.740
LP43_0252	LP43_0262	LP43_0252	LP43_0262	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	Hypothetical protein.	0.662
LP43_0252	LP43_0263	LP43_0252	LP43_0263	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	Hypothetical protein.	0.662
LP43_0252	pyrB	LP43_0252	LP43_0260	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	0.740
LP43_0253	LP43_0252	LP43_0253	LP43_0252	Putative proline rich signal peptide protein.	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.834
LP43_0253	LP43_0254	LP43_0253	LP43_0254	Putative proline rich signal peptide protein.	Nitrogen regulation protein NtrY.	0.954
LP43_0253	LP43_0256	LP43_0253	LP43_0256	Putative proline rich signal peptide protein.	Trk system potassium uptake protein TrkA.	0.845
LP43_0253	LP43_0257	LP43_0253	LP43_0257	Putative proline rich signal peptide protein.	Protein YqgE; Belongs to the UPF0301 (AlgH) family.	0.762
LP43_0253	LP43_0258	LP43_0253	LP43_0258	Putative proline rich signal peptide protein.	Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.	0.712
LP43_0253	LP43_0259	LP43_0253	LP43_0259	Putative proline rich signal peptide protein.	Uracil phosphoribosyltransferase/Pyrimidine operon regulatory protein PyrR.	0.712
LP43_0253	LP43_0261	LP43_0253	LP43_0261	Putative proline rich signal peptide protein.	Dihydroorotase.	0.712
LP43_0253	LP43_0262	LP43_0253	LP43_0262	Putative proline rich signal peptide protein.	Hypothetical protein.	0.662
LP43_0253	LP43_0263	LP43_0253	LP43_0263	Putative proline rich signal peptide protein.	Hypothetical protein.	0.662
LP43_0253	pyrB	LP43_0253	LP43_0260	Putative proline rich signal peptide protein.	Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	0.712

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