Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LP43_0380ABC-type tungstate transport system, periplasmic binding protein. (286 aa)    
Predicted Functional Partners:
LP43_2479
ABC-type tungstate transport system, permease protein.
 
  
 0.926
moeA
Molybdopterin biosynthesis protein MoeA/Periplasmic molybdate-binding domain.
 
  
  0.783
LP43_2480
ABC-type tungstate transport system, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
  0.769
fdhD
Formate dehydrogenase chain D; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
     0.765
LP43_0381
TonB-dependent receptor.
       0.718
modE
DNA-binding domain of ModE.
    
  0.703
LP43_0838
Formate dehydrogenase-O, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
     0.657
LP43_0843
Tungsten-containing formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.641
LP43_0383
Putative DNA-binding protein.
 
     0.624
LP43_0841
Formate dehydrogenase O gamma subunit.
 
     0.584
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
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