Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LP43_0385Secreted protein, containing von Willebrand factor (VWF) type A domain. (316 aa)    
Predicted Functional Partners:
LP43_0386
Secreted protein, containing von Willebrand factor (VWF) type A domain.
      
0.833
LP43_0387
Putative biopolymer transport protein, ExbB family.
       0.702
LP43_0389
Serine/threonine kinase.
       0.549
LP43_0390
Hypothetical protein.
       0.549
LP43_0391
Hypothetical protein.
       0.549
LP43_0392
Hypothetical protein.
       0.460
LP43_0858
Hypothetical protein.
   
 
  0.458
LP43_1401
Flavodoxin reductase (ferredoxin-NADPH reductases) family 1/Vanillate O-demethylase oxidoreductase.
   
 
  0.458
mgdC
N-methyl glutamate dehydrogenase/oxidoreductase subunit C; Belongs to the GcvT family.
     
  0.457
LP43_0384
DNA-binding domain of ModE.
       0.440
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.