Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
LP43_0549Lipopolysaccharide heptosyltransferase I. (345 aa)    
Predicted Functional Partners:
LP43_0561
ADP-heptose--lipooligosaccharide heptosyltransferase II.
 
0.989
hldE
ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate kinase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
  
 0.971
LP43_2396
3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
  
 0.956
LP43_0554
UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG.
 
 
 0.945
LP43_0555
Lipopolysaccharide core biosynthesis protein WaaP, heptosyl-I-kinase; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
 
 
 0.943
LP43_0501
Histidinol-phosphatase.
 
  
 0.887
LP43_0559
InaA protein.
 
 
 0.805
LP43_1659
4Fe-4S ferredoxin, iron-sulfur binding.
  
   0.795
LP43_0553
Phosphoheptose isomerase 1.
 
   
 0.769
thrB
Homoserine kinase; Belongs to the pseudomonas-type ThrB family.
       0.768
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
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