Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LP43_0573Cell division protein BolA; Belongs to the BolA/IbaG family. (89 aa)    
Predicted Functional Partners:
LP43_2520
Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 0.914
LP43_0575
Intracellular septation protein IspA; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
  
    0.845
yciL
YciL protein.
       0.833
LP43_0572
Hypothetical protein.
       0.774
LP43_0576
Putative metal-dependent phosphoesterases (PHP family).
       0.607
LP43_2100
Non-specific DNA-binding protein Dps/Iron-binding ferritin-like antioxidant protein/Ferroxidase; Belongs to the Dps family.
   
  
 0.602
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
    
  0.509
yciO
YciO family; Belongs to the SUA5 family.
       0.497
LP43_0578
1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.477
atpB
ATP synthase A chain; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
    
 
 0.475
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
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