Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LP43_0809Rhodanese-related sulfurtransferase. (107 aa)    
Predicted Functional Partners:
LP43_0808
Protein-L-isoaspartate O-methyltransferase.
       0.803
LP43_0327
Rhodanese-like domain protein.
  
   
 0.799
LP43_1183
Sulfite reductase [NADPH] flavoprotein alpha-component.
     
 0.782
LP43_1911
Phosphoadenylyl-sulfate reductase [thioredoxin]/Adenylyl-sulfate reductase [thioredoxin]; Reduction of activated sulfate into sulfite.
     
 0.780
LP43_2192
Superoxide dismutase [Fe]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 0.770
LP43_1393
Anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.726
LP43_0901
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
  0.714
LP43_2303
Assimilatory nitrate reductase large subunit NapA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.709
LP43_2406
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
  0.709
soxZ
Sulfur oxidation protein SoxZ.
     
 0.703
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
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