Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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co-expression
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[Homology]
Score
LP43_0946Chemotaxis regulator. (124 aa)    
Predicted Functional Partners:
cheZ
Chemotaxis response - phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
 
 0.990
cheA-3
Signal transduction histidine kinase CheA.
 
 0.982
LP43_2118
Hypothetical protein.
  
 0.968
LP43_2231
Hypothetical protein.
  
 0.964
LP43_2119
Hypothetical protein.
  
 0.949
fliN
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
 
  0.947
LP43_2129
Sensory box histidine kinase/response regulator.
 
 0.942
cheW-2
Positive regulator of CheA protein activity (CheW).
 
 
 0.941
LP43_2228
Hypothetical protein.
  
 0.940
LP43_1567
Hypothetical protein.
 
 0.924
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
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