Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LP43_0981Hypothetical protein. (69 aa)    
Predicted Functional Partners:
LP43_0982
Z-ring-associated protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
 
    0.903
LP43_2032
Hypothetical protein.
  
     0.754
LP43_0980
Hypothetical protein; Belongs to the UPF0149 family.
 
    0.706
LP43_2419
Hypothetical protein.
  
     0.702
LP43_1365
Cyclic AMP receptor protein.
  
     0.608
LP43_0977
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase.
       0.564
LP43_0978
2-octaprenyl-6-methoxyphenol hydroxylase.
       0.564
LP43_0979
Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family.
       0.564
LP43_1290
Hypothetical protein.
  
     0.553
LP43_2181
Outer membrane protein NlpB.
  
     0.547
Your Current Organism:
Methylophaga thiooxydans
NCBI taxonomy Id: 392484
Other names: DSM 22068, M. thiooxydans, Methylophaga thiooxidans, Methylophaga thiooxydans corrig. Boden et al. 2011, VKM B-2586, strain DMS010
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